# Generated by roxygen2: do not edit by hand

export(TGL.kmeans2)
export(create_feature_mat)
export(expand_markers)
export(import_layout)
export(plot_markers)
export(sc_marker_clusts)
export(sc_marker_split)
export(sc_pipe_clean)
export(sc_pipe_cluster)
export(sc_pipe_init_sort)
export(sc_pipe_plots)
export(sc_pipe_sort)
export(sc_proj_mat_on_marks)
export(scc_cluster)
export(scc_cluster_kmeans)
export(scc_cluster_knn_graph)
export(scc_import_clust)
export(scm_import_mat)
export(scm_new_matrix)
export(scm_read_scmat_mars)
export(scm_remove_ambient_by_epsilon)
export(scm_sub_mat)
export(scp_compute_balanced_clust_confusion)
export(scp_compute_cell_order)
export(scp_compute_clust_knn_graph)
export(scp_compute_confusion)
export(scp_init_plot)
export(scp_plot_clust_2d)
export(scp_plot_clust_2d_by_meta_field)
export(scp_plot_confusion_mat)
export(scp_plot_gene_2d)
export(scp_plot_mat)
export(scp_plot_metadata_factor)
export(scp_set_clust_cols)
export(select_markers)
export(tgscm_cluster_markers)
export(tgscm_export)
export(tgscm_reduce)
export(umi_gene_stat)
exportMethods(initialize)
exportMethods(show)
exportMethods(tgscm_export)
import(Matrix)
import(dplyr)
import(methods)
import(zoo)
importClassesFrom(Matrix,Matrix)
importClassesFrom(Matrix,dgCMatrix)
importClassesFrom(Matrix,dgeMatrix)
importClassesFrom(graph,graphNEL)
importFrom(KernSmooth,bkde2D)
importFrom(Rgraphviz,layoutGraph)
importFrom(data.table,fread)
importFrom(graph,addEdge)
importFrom(graph,addNode)
importFrom(graph,nodeRenderInfo)
importFrom(graph,plot)
